digraph workflow { graph [_draw_="c 9 -#fffffe00 C 7 -#eeeeee P 4 0 0 0 458 1905 458 1905 0 ", bb="0,0,1905,458", bgcolor="#eeeeee", clusterrank=local, color=black, dpi=96, fontsize=10, labeljust=left, nodesep=0.05, ranksep=0.22, xdotversion=1.7 ]; node [color=black, fillcolor=lightgoldenrodyellow, fontcolor=black, fontname=Helvetica, fontsize=10, height=0, label="\N", shape=record, style=filled, width=0 ]; edge [arrowsize=0.7, color=black, fontcolor=black, fontname=Helvetica, fontsize=8 ]; subgraph cluster_inputs { graph [_draw_="S 6 -dashed c 7 -#000000 C 7 -#eeeeee P 4 8 395 8 450 1897 450 1897 395 ", _ldraw_="F 10 11 -Times-Roman c 7 -#000000 T 58 438 0 84 15 -Workflow Inputs ", bb="8,395,1897,450", label="Workflow Inputs", lheight=0.15, lp="58,440.5", lwidth=1.17, rank=same, style=dashed ]; tumor_sample_name [_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 16 403.5 16 422.5 136 422.5 136 403.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 76 410.5 0 104 17 -tumor_sample_name ", fillcolor="#94DDF4", height=0.27778, label=tumor_sample_name, pos="76,413", rects="16,403.5,136,422.5", width=1.6667]; normal_sample_name [_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 1196.5 403.5 1196.5 422.5 1321.5 422.5 1321.5 403.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1259 410.5 0 109 18 -normal_sample_name ", fillcolor="#94DDF4", height=0.27778, label=normal_sample_name, pos="1259,413", rects="1196.5,403.5,1321.5,422.5", width=1.7361]; vcf [_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 713 403.5 713 422.5 745 422.5 745 403.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 729 410.5 0 16 3 -vcf ", fillcolor="#94DDF4", height=0.27778, label=vcf, pos="729,413", rects="713,403.5,745,422.5", width=0.44444]; tumor_bam [_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 207.5 403.5 207.5 422.5 280.5 422.5 280.5 403.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 244 410.5 0 57 9 -tumor_bam ", fillcolor="#94DDF4", height=0.27778, label=tumor_bam, pos="244,413", rects="207.5,403.5,280.5,422.5", width=1.0139]; filter_mapq0_threshold [_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 284.5 403.5 284.5 422.5 413.5 422.5 413.5 403.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 349 410.5 0 113 22 -filter_mapq0_threshold ", fillcolor="#94DDF4", height=0.27778, label=filter_mapq0_threshold, pos="349,413", rects="284.5,403.5,413.5,422.5", width=1.7917]; known_variants [_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 749 403.5 749 422.5 843 422.5 843 403.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 796 410.5 0 78 14 -known_variants ", fillcolor="#94DDF4", height=0.27778, label=known_variants, pos="796,413", rects="749,403.5,843,422.5", width=1.3056]; gnomad_field_name [_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 847 403.5 847 422.5 963 422.5 963 403.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 905 410.5 0 100 17 -gnomad_field_name ", fillcolor="#94DDF4", height=0.27778, label=gnomad_field_name, pos="905,413", rects="847,403.5,963,422.5", width=1.6111]; reference [_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 140.5 403.5 140.5 422.5 203.5 422.5 203.5 403.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 172 410.5 0 47 9 -reference ", fillcolor="#94DDF4", height=0.27778, label=reference, pos="172,413", rects="140.5,403.5,203.5,422.5", width=0.875]; do_cle_vcf_filter [_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 967 403.5 967 422.5 1063 422.5 1063 403.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1015 410.5 0 80 17 -do_cle_vcf_filter ", fillcolor="#94DDF4", height=0.27778, label=do_cle_vcf_filter, pos="1015,413", rects="967,403.5,1063,422.5", width=1.3333]; filter_somatic_llr_tumor_purity [_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 1325.5 403.5 1325.5 422.5 1492.5 422.5 1492.5 403.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1409 410.5 0 151 31 -filter_somatic_llr_tumor_purity ", fillcolor="#94DDF4", height=0.27778, label=filter_somatic_llr_tumor_purity, pos="1409,413", rects="1325.5,403.5,1492.5,422.5", width=2.3194]; filter_gnomADe_maximum_population_allele_frequency [_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 417.5 403.5 417.5 422.5 708.5 422.5 708.5 403.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 563 410.5 0 275 50 -filter_gnomADe_maximum_population_allele_frequency ", fillcolor="#94DDF4", height=0.27778, label=filter_gnomADe_maximum_population_allele_frequency, pos="563,413", rects="417.5,403.5,708.5,422.5", width=4.0417]; filter_somatic_llr_threshold [_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 1496.5 403.5 1496.5 422.5 1645.5 422.5 1645.5 403.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1571 410.5 0 133 28 -filter_somatic_llr_threshold ", fillcolor="#94DDF4", height=0.27778, label=filter_somatic_llr_threshold, pos="1571,413", rects="1496.5,403.5,1645.5,422.5", width=2.0694]; filter_somatic_llr_normal_contamination_rate [_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 1649.5 403.5 1649.5 422.5 1888.5 422.5 1888.5 403.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1769 410.5 0 223 44 -filter_somatic_llr_normal_contamination_rate ", fillcolor="#94DDF4", height=0.27778, label=filter_somatic_llr_normal_contamination_rate, pos="1769,413", rects="1649.5,403.5,1888.5,422.5", width=3.3194]; filter_minimum_depth [_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 1067.5 403.5 1067.5 422.5 1192.5 422.5 1192.5 403.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1130 410.5 0 109 20 -filter_minimum_depth ", fillcolor="#94DDF4", height=0.27778, label=filter_minimum_depth, pos="1130,413", rects="1067.5,403.5,1192.5,422.5", width=1.7361]; } subgraph cluster_outputs { graph [_draw_="S 6 -dashed c 7 -#000000 C 7 -#eeeeee P 4 1306 8 1306 63 1414 63 1414 8 ", _ldraw_="F 10 11 -Times-Roman c 7 -#000000 T 1360 15 0 92 16 -Workflow Outputs ", bb="1306,8,1414,63", label="Workflow Outputs", labelloc=b, lheight=0.15, lp="1360,17.5", lwidth=1.28, rank=same, style=dashed ]; filtered_vcf [_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 1324.5 35.5 1324.5 54.5 1395.5 54.5 1395.5 35.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1360 42.5 0 55 12 -filtered_vcf ", fillcolor="#94DDF4", height=0.27778, label=filtered_vcf, pos="1360,45", rects="1324.5,35.5,1395.5,54.5", width=0.98611]; } filter_vcf_depth [_draw_="c 7 -#000000 C 7 -#fafad2 P 4 954 170.5 954 189.5 1304 189.5 1304 170.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1129 177.5 0 334 68 -filter variants at sites below a given sequence depth in each sample ", height=0.27778, label="filter variants at sites below a given sequence depth in each sample", pos="1129,180", rects="954,170.5,1304,189.5", width=4.8611]; tumor_sample_name -> filter_vcf_depth [_draw_="c 7 -#000000 B 10 93.55 403.51 108.3 395.01 127 380.41 127 361 127 361 127 361 127 224 127 203.75 656.53 190.22 945.69 184.34 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 945.72 186.79 952.67 184.2 945.62 181.89 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 158 290.6 0 62 12 -sample_names ", label=sample_names, lp="158,292.5", pos="e,954.18,184.17 93.551,403.51 108.3,395.01 127,380.41 127,361 127,361 127,361 127,224 127,203.75 656.53,190.22 945.69,184.34"]; filter_vcf_somatic_llr [_draw_="c 7 -#000000 C 7 -#fafad2 P 4 1181 125.5 1181 144.5 1539 144.5 1539 125.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1360 132.5 0 342 71 -use the binomial/llr somatic filter to weed out low confidence variants ", height=0.27778, label="use the binomial/llr somatic filter to weed out low confidence variants", pos="1360,135", rects="1181,125.5,1539,144.5", width=4.9722]; tumor_sample_name -> filter_vcf_somatic_llr [_draw_="c 7 -#000000 B 10 63.03 403.53 51.02 394.55 35 379.18 35 361 35 361 35 361 35 179 35 150.88 807.8 140.63 1173.02 137.36 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1172.81 139.81 1179.79 137.3 1172.77 134.91 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 77.5 268.1 0 85 17 -tumor_sample_name ", label=tumor_sample_name, lp="77.5,270", pos="e,1181.3,137.28 63.027,403.53 51.016,394.55 35,379.18 35,361 35,361 35,361 35,179 35,150.88 807.8,140.63 1173,137.36"]; normal_sample_name -> filter_vcf_depth [_draw_="c 7 -#000000 B 10 1248 403.52 1237.42 394.32 1223 378.56 1223 361 1223 361 1223 361 1223 224 1223 208.72 1212.6 198.84 1198.72 192.47 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1199.99 190.34 1192.58 190.01 1198.17 194.89 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1254 290.6 0 62 12 -sample_names ", label=sample_names, lp="1254,292.5", pos="e,1191.2,189.45 1248,403.52 1237.4,394.32 1223,378.56 1223,361 1223,361 1223,361 1223,224 1223,208.72 1212.6,198.84 1198.7,192.47"]; normal_sample_name -> filter_vcf_somatic_llr [_draw_="c 7 -#000000 B 10 1276.9 403.6 1291.94 395.16 1311 380.6 1311 361 1311 361 1311 361 1311 179 1311 165.82 1321.14 155.73 1332.2 148.65 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1333.36 150.81 1338.19 145.18 1330.91 146.57 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1356 268.1 0 90 18 -normal_sample_name ", label=normal_sample_name, lp="1356,270", pos="e,1339.5,144.43 1276.9,403.6 1291.9,395.16 1311,380.6 1311,361 1311,361 1311,361 1311,179 1311,165.82 1321.1,155.73 1332.2,148.65"]; filter_known_variants [_draw_="c 7 -#000000 C 7 -#fafad2 P 4 478.5 350.5 478.5 369.5 1041.5 369.5 1041.5 350.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 760 357.5 0 547 109 -Adds an INFO tag (PREVIOUSLY_DISCOVERED) flagging variants in the target vcf \ present in a known-variants file ", height=0.27778, label="Adds an INFO tag (PREVIOUSLY_DISCOVERED) flagging variants in the target vcf present in a known-variants file", pos="760,360", rects="478.5,350.5,1041.5,369.5", width=7.8194]; vcf -> filter_known_variants [_draw_="c 7 -#000000 B 4 734.12 403.58 738.59 396.23 745.19 385.37 750.6 376.46 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 752.65 377.81 754.19 370.56 748.46 375.27 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 755.5 380.6 0 13 3 -vcf ", label=vcf, lp="755.5,382.5", pos="e,754.98,369.26 734.12,403.58 738.59,396.23 745.19,385.37 750.6,376.46"]; filter_vcf_mapq0 [_draw_="c 7 -#000000 C 7 -#fafad2 P 4 150 260.5 150 279.5 452 279.5 452 260.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 301 267.5 0 286 59 -filter vcf for variants with high percentage of mapq0 reads ", height=0.27778, label="filter vcf for variants with high percentage of mapq0 reads", pos="301,270", rects="150,260.5,452,279.5", width=4.1944]; tumor_bam -> filter_vcf_mapq0 [_draw_="c 7 -#000000 B 7 243.67 403.8 243.38 389.06 244.08 357.32 254 333 261.49 314.64 275.85 296.95 286.73 285.19 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 288.24 287.16 291.31 280.4 284.7 283.77 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 277 335.6 0 46 9 -tumor_bam ", label=tumor_bam, lp="277,337.5", pos="e,292.35,279.31 243.67,403.8 243.38,389.06 244.08,357.32 254,333 261.49,314.64 275.85,296.95 286.73,285.19"]; filter_mapq0_threshold -> filter_vcf_mapq0 [_draw_="c 7 -#000000 B 7 338.29 403.6 329.33 395.9 317.07 383.66 311 370 299.02 343.03 298.58 307.97 299.61 287.62 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 302.03 288.05 300.05 280.91 297.14 287.73 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 322 335.6 0 40 9 -threshold ", label=threshold, lp="322,337.5", pos="e,300.15,279.4 338.29,403.6 329.33,395.9 317.07,383.66 311,370 299.02,343.03 298.58,307.97 299.61,287.62"]; known_variants -> filter_known_variants [_draw_="c 7 -#000000 B 4 790.06 403.58 784.81 396.15 777.05 385.15 770.72 376.19 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 772.75 374.81 766.71 370.5 768.74 377.63 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 810 380.6 0 64 14 -known_variants ", label=known_variants, lp="810,382.5", pos="e,765.83,369.26 790.06,403.58 784.81,396.15 777.05,385.15 770.72,376.19"]; filter_vcf_gnomADe_allele_freq [_draw_="c 7 -#000000 C 7 -#fafad2 P 4 493.5 305.5 493.5 324.5 654.5 324.5 654.5 305.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 574 312.5 0 145 30 -Custom allele frequency filter ", height=0.27778, label="Custom allele frequency filter", pos="574,315", rects="493.5,305.5,654.5,324.5", width=2.2361]; gnomad_field_name -> filter_vcf_gnomADe_allele_freq [_draw_="c 7 -#000000 B 10 935.82 403.55 975.21 392.6 1038.75 374.4 1042 370 1047.28 362.85 1048.05 356.51 1042 350 1016.77 322.87 791.16 \ 317.13 662.63 316.08 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 662.84 313.63 655.82 316.03 662.8 318.53 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1069 358.1 0 46 10 -field_name ", label=field_name, lp="1069,360", pos="e,654.31,316.02 935.82,403.55 975.21,392.6 1038.7,374.4 1042,370 1047.3,362.85 1048.1,356.51 1042,350 1016.8,322.87 791.16,317.13 \ 662.63,316.08"]; reference -> filter_vcf_mapq0 [_draw_="c 7 -#000000 B 7 174.25 403.81 178.76 388.51 190.15 355.14 209 333 227.49 311.28 255.37 293.94 275.59 283.19 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 276.5 285.48 281.59 280.08 274.25 281.12 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 229 335.6 0 40 9 -reference ", label=reference, lp="229,337.5", pos="e,282.93,279.39 174.25,403.81 178.76,388.51 190.15,355.14 209,333 227.49,311.28 255.37,293.94 275.59,283.19"]; filter_vcf_cle [_draw_="c 7 -#000000 C 7 -#fafad2 P 4 989 215.5 989 234.5 1123 234.5 1123 215.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1056 222.5 0 118 24 -cle_annotated_vcf_filter ", height=0.27778, label=cle_annotated_vcf_filter, pos="1056,225", rects="989,215.5,1123,234.5", width=1.8611]; do_cle_vcf_filter -> filter_vcf_cle [_draw_="c 7 -#000000 B 10 1038.58 403.5 1064.65 393.37 1103 375.92 1103 361 1103 361 1103 361 1103 269 1103 256.03 1093.13 245.91 1082.44 \ 238.76 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1083.94 236.81 1076.68 235.28 1081.4 241 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1112.5 313.1 0 19 6 -filter ", label=filter, lp="1112.5,315", pos="e,1075.4,234.49 1038.6,403.5 1064.6,393.37 1103,375.92 1103,361 1103,361 1103,361 1103,269 1103,256.03 1093.1,245.91 1082.4,238.76"]; filter_somatic_llr_tumor_purity -> filter_vcf_somatic_llr [_draw_="c 7 -#000000 B 10 1409 403.7 1409 393.6 1409 376.05 1409 361 1409 361 1409 361 1409 179 1409 165.82 1398.86 155.73 1387.8 148.65 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1389.09 146.57 1381.81 145.18 1386.64 150.81 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1435 268.1 0 52 12 -tumor_purity ", label=tumor_purity, lp="1435,270", pos="e,1380.5,144.43 1409,403.7 1409,393.6 1409,376.05 1409,361 1409,361 1409,361 1409,179 1409,165.82 1398.9,155.73 1387.8,148.65"]; filter_gnomADe_maximum_population_allele_frequency -> filter_vcf_gnomADe_allele_freq [_draw_="c 7 -#000000 B 10 483.4 403.54 415.72 395.52 327.83 382.83 317 370 311.27 363.21 311.14 356.68 317 350 322.68 343.52 413.48 332.63 \ 485.56 324.92 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 485.6 327.38 492.3 324.21 485.08 322.51 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 397 358.1 0 160 35 -maximum_population_allele_frequency ", label=maximum_population_allele_frequency, lp="397,360", pos="e,493.81,324.05 483.4,403.54 415.72,395.52 327.83,382.83 317,370 311.27,363.21 311.14,356.68 317,350 322.68,343.52 413.48,332.63 \ 485.56,324.92"]; filter_somatic_llr_threshold -> filter_vcf_somatic_llr [_draw_="c 7 -#000000 B 10 1553.45 403.51 1538.7 395.01 1520 380.41 1520 361 1520 361 1520 361 1520 179 1520 162.55 1488.08 152.22 1452.75 \ 145.82 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1453.49 143.46 1446.18 144.69 1452.66 148.29 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1540 268.1 0 40 9 -threshold ", label=threshold, lp="1540,270", pos="e,1444.7,144.44 1553.4,403.51 1538.7,395.01 1520,380.41 1520,361 1520,361 1520,361 1520,179 1520,162.55 1488.1,152.22 1452.7,145.82"]; filter_somatic_llr_normal_contamination_rate -> filter_vcf_somatic_llr [_draw_="c 7 -#000000 B 10 1712.01 403.55 1689.1 396.61 1668 383.98 1668 361 1668 361 1668 361 1668 179 1668 162.27 1595.76 151.65 1521.25 \ 145.16 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1521.79 142.75 1514.61 144.6 1521.37 147.63 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1724 268.1 0 112 25 -normal_contamination_rate ", label=normal_contamination_rate, lp="1724,270", pos="e,1513.1,144.47 1712,403.55 1689.1,396.61 1668,383.98 1668,361 1668,361 1668,361 1668,179 1668,162.27 1595.8,151.65 1521.2,145.16"]; filter_minimum_depth -> filter_vcf_depth [_draw_="c 7 -#000000 B 10 1130 403.7 1130 393.6 1130 376.05 1130 361 1130 361 1130 361 1130 224 1130 215.31 1129.79 205.62 1129.57 197.65 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1132.02 197.68 1129.35 190.75 1127.12 197.83 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1163 290.6 0 66 13 -minimum_depth ", label=minimum_depth, lp="1163,292.5", pos="e,1129.3,189.24 1130,403.7 1130,393.6 1130,376.05 1130,361 1130,361 1130,361 1130,224 1130,215.31 1129.8,205.62 1129.6,197.65"]; filter_vcf_depth -> filter_vcf_somatic_llr [_draw_="c 7 -#000000 B 4 1174.64 170.5 1212.45 163.47 1266.25 153.45 1306.16 146.02 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1306.54 148.44 1312.97 144.75 1305.64 143.63 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1271.5 155.6 0 13 3 -vcf ", label=vcf, lp="1271.5,157.5", pos="e,1314.5,144.48 1174.6,170.5 1212.4,163.47 1266.3,153.45 1306.2,146.02"]; set_final_vcf_name [_draw_="c 7 -#000000 C 7 -#fafad2 P 4 1311 80.5 1311 99.5 1409 99.5 1409 80.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1360 87.5 0 82 14 -Staged Renamer ", height=0.27778, label="Staged Renamer", pos="1360,90", rects="1311,80.5,1409,99.5", width=1.3611]; filter_vcf_somatic_llr -> set_final_vcf_name [_draw_="c 7 -#000000 B 4 1360 125.71 1360 120.59 1360 113.85 1360 107.67 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1362.45 107.78 1360 100.78 1357.55 107.78 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1375.5 110.6 0 31 8 -original ", label=original, lp="1375.5,112.5", pos="e,1360,99.265 1360,125.71 1360,120.59 1360,113.85 1360,107.67"]; filter_vcf_mapq0 -> filter_vcf_cle [_draw_="c 7 -#000000 B 4 450.16 260.5 610.22 251.39 858 237.28 981.18 230.26 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 981.11 232.72 987.96 229.88 980.83 227.83 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 752.5 245.6 0 13 3 -vcf ", label=vcf, lp="752.5,247.5", pos="e,989.47,229.79 450.16,260.5 610.22,251.39 858,237.28 981.18,230.26"]; filter_vcf_gnomADe_allele_freq -> filter_vcf_mapq0 [_draw_="c 7 -#000000 B 4 520.06 305.5 474.91 298.39 410.46 288.24 363.15 280.79 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 363.62 278.38 356.32 279.71 362.85 283.22 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 467.5 290.6 0 13 3 -vcf ", label=vcf, lp="467.5,292.5", pos="e,354.82,279.48 520.06,305.5 474.91,298.39 410.46,288.24 363.15,280.79"]; filter_known_variants -> filter_vcf_gnomADe_allele_freq [_draw_="c 7 -#000000 B 4 723.25 350.5 693.19 343.56 650.57 333.7 618.57 326.3 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 619.52 324.01 612.15 324.82 618.41 328.78 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 689.5 335.6 0 13 3 -vcf ", label=vcf, lp="689.5,337.5", pos="e,610.67,324.48 723.25,350.5 693.19,343.56 650.57,333.7 618.57,326.3"]; filter_vcf_cle -> filter_vcf_depth [_draw_="c 7 -#000000 B 4 1070.42 215.5 1081.02 209.26 1095.6 200.68 1107.56 193.63 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1108.52 195.91 1113.3 190.25 1106.03 191.69 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1105.5 200.6 0 13 3 -vcf ", label=vcf, lp="1105.5,202.5", pos="e,1114.6,189.48 1070.4,215.5 1081,209.26 1095.6,200.68 1107.6,193.63"]; set_final_vcf_name -> filtered_vcf [_draw_="c 7 -#000000 B 4 1360 80.71 1360 75.59 1360 68.85 1360 62.67 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1362.45 62.78 1360 55.78 1357.55 62.78 ", pos="e,1360,54.265 1360,80.709 1360,75.593 1360,68.848 1360,62.666"]; }