Workflow: snpeff_all.cwl

Fetched 2023-01-04 21:47:47 GMT
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Inputs

ID Type Title Doc
gtf File
vcf File
dbdir String
dbname String
genome File
protein File
outprefix String

Steps

ID Runs Label Doc
snpeff_build
../tools/snpeff-build.cwl (CommandLineTool)
snpeff_annotate
../tools/snpeff-annotate.cwl (CommandLineTool)

Outputs

ID Type Label Doc
snpeff_genes File
snpeff_summary File
snpeff_vcf_with_tbi File
Permalink: https://w3id.org/cwl/view/git/356c47bb87dbcd9a9cb565f147b0dad298dea6cb/workflows/snpeff_all.cwl