digraph workflow { graph [_draw_="c 9 -#fffffe00 C 7 -#eeeeee P 4 0 0 0 323 557 323 557 0 ", bb="0,0,557,323", bgcolor="#eeeeee", clusterrank=local, color=black, dpi=96, fontsize=10, labeljust=left, nodesep=0.05, ranksep=0.22, xdotversion=1.7 ]; node [color=black, fillcolor=lightgoldenrodyellow, fontcolor=black, fontname=Helvetica, fontsize=10, height=0, label="\N", shape=record, style=filled, width=0 ]; edge [arrowsize=0.7, color=black, fontcolor=black, fontname=Helvetica, fontsize=8 ]; subgraph cluster_inputs { graph [_draw_="S 6 -dashed c 7 -#000000 C 7 -#eeeeee P 4 127 260 127 315 433 315 433 260 ", _ldraw_="F 10 11 -Times-Roman c 7 -#000000 T 177 303 0 84 15 -Workflow Inputs ", bb="127,260,433,315", label="Workflow Inputs", lheight=0.15, lp="177,305.5", lwidth=1.17, rank=same, style=dashed ]; gc_assm_name [_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 135 268.5 135 287.5 227 287.5 227 268.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 181 275.5 0 76 12 -gc_assm_name ", fillcolor="#94DDF4", height=0.27778, label=gc_assm_name, pos="181,278", rects="135,268.5,227,287.5", width=1.2778]; entries [_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 297 268.5 297 287.5 347 287.5 347 268.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 322 275.5 0 34 7 -entries ", fillcolor="#94DDF4", height=0.27778, label=entries, pos="322,278", rects="297,268.5,347,287.5", width=0.69444]; seq_submit [_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 351.5 268.5 351.5 287.5 424.5 287.5 424.5 268.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 388 275.5 0 57 10 -seq_submit ", fillcolor="#94DDF4", height=0.27778, label=seq_submit, pos="388,278", rects="351.5,268.5,424.5,287.5", width=1.0139]; taxon_db [_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 231.5 268.5 231.5 287.5 292.5 287.5 292.5 268.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 262 275.5 0 45 8 -taxon_db ", fillcolor="#94DDF4", height=0.27778, label=taxon_db, pos="262,278", rects="231.5,268.5,292.5,287.5", width=0.84722]; } subgraph cluster_outputs { graph [_draw_="S 6 -dashed c 7 -#000000 C 7 -#eeeeee P 4 8 8 8 63 549 63 549 8 ", _ldraw_="F 10 11 -Times-Roman c 7 -#000000 T 62 15 0 92 16 -Workflow Outputs ", bb="8,8,549,63", label="Workflow Outputs", labelloc=b, lheight=0.15, lp="62,17.5", lwidth=1.28, rank=same, style=dashed ]; ids_out [_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 307 35.5 307 54.5 359 54.5 359 35.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 333 42.5 0 36 7 -ids_out ", fillcolor="#94DDF4", height=0.27778, label=ids_out, pos="333,45", rects="307,35.5,359,54.5", width=0.72222]; seqid_list [_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 82.5 35.5 82.5 54.5 145.5 54.5 145.5 35.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 114 42.5 0 47 10 -seqid_list ", fillcolor="#94DDF4", height=0.27778, label=seqid_list, pos="114,45", rects="82.5,35.5,145.5,54.5", width=0.875]; gencoll_asn [_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 229 35.5 229 54.5 303 54.5 303 35.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 266 42.5 0 58 11 -gencoll_asn ", fillcolor="#94DDF4", height=0.27778, label=gencoll_asn, pos="266,45", rects="229,35.5,303,54.5", width=1.0278]; submit_block_template [_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 363.5 35.5 363.5 54.5 494.5 54.5 494.5 35.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 429 42.5 0 115 21 -submit_block_template ", fillcolor="#94DDF4", height=0.27778, label=submit_block_template, pos="429,45", rects="363.5,35.5,494.5,54.5", width=1.8194]; stats_report [_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 149.5 35.5 149.5 54.5 224.5 54.5 224.5 35.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 187 42.5 0 59 12 -stats_report ", fillcolor="#94DDF4", height=0.27778, label=stats_report, pos="187,45", rects="149.5,35.5,224.5,54.5", width=1.0417]; asncache [_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 16 35.5 16 54.5 78 54.5 78 35.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 47 42.5 0 46 8 -asncache ", fillcolor="#94DDF4", height=0.27778, label=asncache, pos="47,45", rects="16,35.5,78,54.5", width=0.86111]; order [_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 499 35.5 499 54.5 541 54.5 541 35.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 520 42.5 0 26 5 -order ", fillcolor="#94DDF4", height=0.27778, label=order, pos="520,45", rects="499,35.5,541,54.5", width=0.58333]; } Create_Assembly_From_Sequences [_draw_="c 7 -#000000 C 7 -#fafad2 P 4 179.5 125.5 179.5 144.5 362.5 144.5 362.5 125.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 271 132.5 0 167 30 -Create Assembly From Sequences ", height=0.27778, label="Create Assembly From Sequences", pos="271,135", rects="179.5,125.5,362.5,144.5", width=2.5417]; gc_assm_name -> Create_Assembly_From_Sequences [_draw_="c 7 -#000000 B 7 176.08 268.54 167.97 253.38 153.93 221.01 167 198 181.27 172.88 210.2 156.86 233.94 147.41 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 234.66 149.75 240.34 144.99 232.93 145.17 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 198.5 200.6 0 63 12 -gc_assm_name ", label=gc_assm_name, lp="198.5,202.5", pos="e,241.76,144.45 176.08,268.54 167.97,253.38 153.93,221.01 167,198 181.27,172.88 210.2,156.86 233.94,147.41"]; Prepare_Seq_entries [_draw_="c 7 -#000000 C 7 -#fafad2 P 4 360.5 215.5 360.5 234.5 497.5 234.5 497.5 215.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 429 222.5 0 121 23 -prepare_seq_entry_input ", height=0.27778, label=prepare_seq_entry_input, pos="429,225", rects="360.5,215.5,497.5,234.5", width=1.9028]; entries -> Prepare_Seq_entries [_draw_="c 7 -#000000 B 7 334.02 268.61 345.07 261.17 362.11 250.36 378 243 382.45 240.94 387.22 239.01 391.99 237.24 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 392.76 239.57 398.54 234.93 391.13 234.95 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 392.5 245.6 0 29 7 -entries ", label=entries, lp="392.5,247.5", pos="e,399.97,234.43 334.02,268.61 345.07,261.17 362.11,250.36 378,243 382.45,240.94 387.22,239.01 391.99,237.24"]; seq_submit -> Prepare_Seq_entries [_draw_="c 7 -#000000 B 4 394.77 268.58 400.86 261 409.94 249.71 417.22 240.65 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 418.93 242.44 421.41 235.44 415.11 239.37 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 437.5 245.6 0 47 10 -seq_submit ", label=seq_submit, lp="437.5,247.5", pos="e,422.36,234.26 394.77,268.58 400.86,261 409.94,249.71 417.22,240.65"]; Cache_Seq_entries [_draw_="c 7 -#000000 C 7 -#fafad2 P 4 270.5 170.5 270.5 189.5 349.5 189.5 349.5 170.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 310 177.5 0 63 11 -prime_cache ", height=0.27778, label=prime_cache, pos="310,180", rects="270.5,170.5,349.5,189.5", width=1.0972]; taxon_db -> Cache_Seq_entries [_draw_="c 7 -#000000 B 7 250.31 268.62 234.93 256.55 211.29 233.69 224 215 232.99 201.77 248.01 193.69 263.01 188.75 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 263.34 191.21 269.36 186.88 261.95 186.51 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 243 223.1 0 38 8 -taxon_db ", label=taxon_db, lp="243,225", pos="e,270.81,186.45 250.31,268.62 234.93,256.55 211.29,233.69 224,215 232.99,201.77 248.01,193.69 263.01,188.75"]; Extract_Assembly_Information_XML [_draw_="c 7 -#000000 C 7 -#fafad2 P 4 199.5 80.5 199.5 99.5 370.5 99.5 370.5 80.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 285 87.5 0 155 31 -Extract Assembly Information II ", height=0.27778, label="Extract Assembly Information II", pos="285,90", rects="199.5,80.5,370.5,99.5", width=2.375]; Extract_Assembly_Information_XML -> stats_report [_draw_="c 7 -#000000 B 4 265.64 80.5 250.87 74.03 230.36 65.02 213.98 57.84 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 215.1 55.66 207.71 55.09 213.13 60.14 ", pos="e,206.32,54.478 265.64,80.505 250.87,74.026 230.36,65.024 213.98,57.84"]; Extract_Assembly_Information [_draw_="c 7 -#000000 C 7 -#fafad2 P 4 27 80.5 27 99.5 195 99.5 195 80.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 111 87.5 0 152 30 -Extract Assembly Information I ", height=0.27778, label="Extract Assembly Information I", pos="111,90", rects="27,80.5,195,99.5", width=2.3333]; Extract_Assembly_Information -> seqid_list [_draw_="c 7 -#000000 B 4 111.58 80.71 111.94 75.59 112.41 68.85 112.84 62.67 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 115.27 62.93 113.32 55.78 110.39 62.59 ", pos="e,113.42,54.265 111.58,80.709 111.94,75.593 112.41,68.848 112.84,62.666"]; Cache_Seq_entries -> ids_out [_draw_="c 7 -#000000 B 13 338.12 170.62 343.37 168.32 348.58 165.47 353 162 376.23 143.74 373.16 129.3 377 100 378.15 91.19 380.81 88.03 \ 377 80 374.38 74.47 363.57 66.08 353.32 59.02 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 354.86 57.1 347.68 55.24 352.13 61.17 ", pos="e,346.42,54.396 338.12,170.62 343.37,168.32 348.58,165.47 353,162 376.23,143.74 373.16,129.3 377,100 378.15,91.186 380.81,88.033 \ 377,80 374.38,74.471 363.57,66.082 353.32,59.021"]; Cache_Seq_entries -> asncache [_draw_="c 7 -#000000 B 10 270.9 177.21 210.22 173.85 96.73 165.02 62 145 40.05 132.34 35.22 123.97 27 100 22.47 86.78 28.84 71.91 35.57 \ 61.12 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 37.39 62.79 39.3 55.62 33.34 60.04 ", pos="e,40.151,54.373 270.9,177.21 210.22,173.85 96.731,165.02 62,145 40.05,132.34 35.223,123.97 27,100 22.466,86.785 28.842,71.906 35.568,\ 61.117"]; Cache_Seq_entries -> Create_Assembly_From_Sequences [_draw_="c 7 -#000000 B 7 278.42 170.66 274.71 168.42 271.4 165.59 269 162 267.18 159.28 266.55 156.02 266.58 152.75 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 268.99 153.19 267.61 145.9 264.15 152.46 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 288.5 155.6 0 39 8 -unplaced ", label=unplaced, lp="288.5,157.5", pos="e,267.84,144.41 278.42,170.66 274.71,168.42 271.4,165.59 269,162 267.18,159.28 266.55,156.02 266.58,152.75"]; Cache_Seq_entries -> Create_Assembly_From_Sequences [_draw_="c 7 -#000000 B 7 310.22 170.5 309.95 165.01 308.78 157.98 305 153 304.01 151.7 302.9 150.49 301.69 149.37 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 303.34 147.54 296.26 145.36 300.43 151.48 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 330 155.6 0 44 9 -asn_cache ", label=asn_cache, lp="330,157.5", pos="e,295.04,144.46 310.22,170.5 309.95,165.01 308.78,157.98 305,153 304.01,151.7 302.9,150.49 301.69,149.37"]; Prepare_Seq_entries -> submit_block_template [_draw_="c 7 -#000000 B 10 429 215.76 429 207.1 429 193.09 429 181 429 181 429 181 429 89 429 80.31 429 70.63 429 62.65 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 431.45 62.76 429 55.76 426.55 62.76 ", pos="e,429,54.243 429,215.76 429,207.1 429,193.09 429,181 429,181 429,181 429,89 429,80.308 429,70.627 429,62.655"]; Prepare_Seq_entries -> order [_draw_="c 7 -#000000 B 10 450.92 215.5 464.75 208.55 480 197.21 480 181 480 181 480 181 480 89 480 81.76 492.33 69.3 503.29 59.66 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 504.61 61.76 508.34 55.35 501.43 58.03 ", pos="e,509.49,54.364 450.92,215.5 464.75,208.55 480,197.21 480,181 480,181 480,181 480,89 480,81.755 492.33,69.303 503.29,59.658"]; Prepare_Seq_entries -> Cache_Seq_entries [_draw_="c 7 -#000000 B 4 405.49 215.5 387.15 208.88 361.51 199.61 341.42 192.35 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 342.3 190.07 334.89 189.99 340.64 194.68 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 391 200.6 0 22 5 -input ", label=input, lp="391,202.5", pos="e,333.46,189.48 405.49,215.5 387.15,208.88 361.51,199.61 341.42,192.35"]; Create_Assembly_From_Sequences -> gencoll_asn [_draw_="c 7 -#000000 B 10 319.22 125.55 352.84 117.48 388.74 103.07 371 80 353.06 56.67 334.88 72.43 307 63 302.32 61.42 297.42 59.56 292.7 \ 57.67 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 293.79 55.47 286.39 55.07 291.93 60 ", pos="e,284.99,54.493 319.22,125.55 352.84,117.48 388.74,103.07 371,80 353.06,56.67 334.88,72.435 307,63 302.32,61.417 297.42,59.562 292.7,\ 57.67"]; Create_Assembly_From_Sequences -> Extract_Assembly_Information_XML [_draw_="c 7 -#000000 B 4 273.7 125.71 275.4 120.47 277.66 113.53 279.71 107.24 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 282 108.12 281.84 100.7 277.34 106.6 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 293 110.6 0 28 7 -asnfile ", label=asnfile, lp="293,112.5", pos="e,282.31,99.265 273.7,125.71 275.4,120.47 277.66,113.53 279.71,107.24"]; Create_Assembly_From_Sequences -> Extract_Assembly_Information [_draw_="c 7 -#000000 B 4 239.39 125.5 213.97 118.67 178.11 109.03 150.74 101.68 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 151.4 99.32 144.01 99.87 150.13 104.05 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 231.5 110.6 0 53 11 -gc_assembly ", label=gc_assembly, lp="231.5,112.5", pos="e,142.55,99.478 239.39,125.5 213.97,118.67 178.11,109.03 150.74,101.68"]; default1 [_draw_="c 7 -#000000 C 7 -#d5aefc P 4 64 125.5 64 144.5 102 144.5 102 125.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 83 132.5 0 22 5 -\"all\" ", fillcolor="#D5AEFC", height=0.27778, label="\"all\"", pos="83,135", rects="64,125.5,102,144.5", width=0.52778]; default1 -> Extract_Assembly_Information [_draw_="c 7 -#000000 B 7 87.91 125.72 91.01 120.57 95.15 113.84 99 108 99.42 107.37 99.85 106.72 100.29 106.07 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 102.19 107.62 104.17 100.47 98.17 104.83 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 108.5 110.6 0 19 6 -filter ", label=filter, lp="108.5,112.5", pos="e,105.03,99.229 87.913,125.72 91.014,120.57 95.147,113.84 99,108 99.418,107.37 99.848,106.72 100.29,106.07"]; default2 [_draw_="c 7 -#000000 C 7 -#d5aefc P 4 106 125.5 106 144.5 156 144.5 156 125.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 131 132.5 0 34 8 -\"all.gi\" ", fillcolor="#D5AEFC", height=0.27778, label="\"all.gi\"", pos="131,135", rects="106,125.5,156,144.5", width=0.69444]; default2 -> Extract_Assembly_Information [_draw_="c 7 -#000000 B 4 127.14 125.71 124.65 120.36 121.33 113.22 118.35 106.81 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 120.66 105.95 115.48 100.64 116.21 108.02 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 135.5 110.6 0 27 7 -outfile ", label=outfile, lp="135.5,112.5", pos="e,114.84,99.265 127.14,125.71 124.65,120.36 121.33,113.22 118.35,106.81"]; default3 [_draw_="c 7 -#000000 C 7 -#d5aefc P 4 263.5 215.5 263.5 234.5 356.5 234.5 356.5 215.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 310 222.5 0 77 15 -\"asn-seq-entry\" ", fillcolor="#D5AEFC", height=0.27778, label="\"asn-seq-entry\"", pos="310,225", rects="263.5,215.5,356.5,234.5", width=1.2917]; default3 -> Cache_Seq_entries [_draw_="c 7 -#000000 B 4 310 215.71 310 210.59 310 203.85 310 197.67 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 312.45 197.78 310 190.78 307.55 197.78 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 318 200.6 0 16 4 -ifmt ", label=ifmt, lp="318,202.5", pos="e,310,189.27 310,215.71 310,210.59 310,203.85 310,197.67"]; }