class: Workflow cwlVersion: v1.0 inputs: [] outputs: file1: type: File outputSource: step1/file1 steps: step1: in: [] out: - file1 - file1csv run: class: CommandLineTool requirements: - class: ShellCommandRequirement arguments: - shellQuote: false valueFrom: > echo "abc" > f.txt; echo "3" > f.txt.size; echo "a" > f.txt.firstletter; echo "a,b,c" > f.csv; echo "1,2,3" > f.csv.columns; echo "ignored" > f.txt.ignoreme; inputs: [] outputs: file1: type: File outputBinding: glob: "f.txt" secondaryFiles: - ".size" - ".firstletter" - "^.csv" file1csv: type: File outputBinding: glob: "f.csv" secondaryFiles: - ".columns"