Workflow: Filter Protein Alignments I
Fetched 2023-01-14 11:30:02 GMT
Verified with cwltool version 3.1.20221201130942
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This workflow is Open Source and may be reused according to the terms of:
https://raw.githubusercontent.com/ncbi/pgap/f225cd99b0e0a5043dd102f8b33a6139fefe9ea4/LICENSE.md
Note that the tools invoked by the workflow may have separate licenses.
Inputs
| ID | Type | Title | Doc |
|---|---|---|---|
| asn_cache | Directory | ||
| prosplign | File | ||
| blast_full | File | ||
| uniColl_asn_cache | Directory |
Steps
| ID | Runs | Label | Doc |
|---|---|---|---|
| cat |
cat.cwl
(CommandLineTool)
|
file concatenation | |
| align_filter |
align_filter.cwl
(CommandLineTool)
|
Filter Protein Alignments I |
Outputs
| ID | Type | Label | Doc |
|---|---|---|---|
| align | File | ||
| align_non_match | File |
Permalink:
https://w3id.org/cwl/view/git/f225cd99b0e0a5043dd102f8b33a6139fefe9ea4/protein_alignment/wf_align_filter.cwl
