digraph workflow { graph [_draw_="c 9 -#fffffe00 C 7 -#eeeeee P 4 0 0 0 368 439 368 439 0 ", bb="0,0,439,368", bgcolor="#eeeeee", clusterrank=local, color=black, dpi=96, fontsize=10, labeljust=left, nodesep=0.05, ranksep=0.22, xdotversion=1.7 ]; node [color=black, fillcolor=lightgoldenrodyellow, fontcolor=black, fontname=Helvetica, fontsize=10, height=0, label="\N", shape=record, style=filled, width=0 ]; edge [arrowsize=0.7, color=black, fontcolor=black, fontname=Helvetica, fontsize=8 ]; subgraph cluster_inputs { graph [_draw_="S 6 -dashed c 7 -#000000 C 7 -#eeeeee P 4 131 305 131 360 334 360 334 305 ", _ldraw_="F 10 11 -Times-Roman c 7 -#000000 T 181 348 0 84 15 -Workflow Inputs ", bb="131,305,334,360", label="Workflow Inputs", lheight=0.15, lp="181,350.5", lwidth=1.17, rank=same, style=dashed ]; replicates [_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 139.5 313.5 139.5 332.5 204.5 332.5 204.5 313.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 172 320.5 0 49 10 -replicates ", fillcolor="#94DDF4", height=0.27778, label=replicates, pos="172,323", rects="139.5,313.5,204.5,332.5", width=0.90278]; idxbase [_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 208.5 313.5 208.5 332.5 263.5 332.5 263.5 313.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 236 320.5 0 39 7 -idxbase ", fillcolor="#94DDF4", height=0.27778, label=idxbase, pos="236,323", rects="208.5,313.5,263.5,332.5", width=0.76389]; blacklist [_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 268 313.5 268 332.5 326 332.5 326 313.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 297 320.5 0 42 9 -blacklist ", fillcolor="#94DDF4", height=0.27778, label=blacklist, pos="297,323", rects="268,313.5,326,332.5", width=0.80556]; } subgraph cluster_outputs { graph [_draw_="S 6 -dashed c 7 -#000000 C 7 -#eeeeee P 4 8 8 8 63 427 63 427 8 ", _ldraw_="F 10 11 -Times-Roman c 7 -#000000 T 62 15 0 92 16 -Workflow Outputs ", bb="8,8,427,63", label="Workflow Outputs", labelloc=b, lheight=0.15, lp="62,17.5", lwidth=1.28, rank=same, style=dashed ]; replicate_narrowpeak_files [_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 16 35.5 16 54.5 164 54.5 164 35.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 90 42.5 0 132 26 -replicate_narrowpeak_files ", fillcolor="#94DDF4", height=0.27778, label=replicate_narrowpeak_files, pos="90,45", rects="16,35.5,164,54.5", width=2.0556]; pooled_narrowpeak_file [_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 168.5 35.5 168.5 54.5 301.5 54.5 301.5 35.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 235 42.5 0 117 22 -pooled_narrowpeak_file ", fillcolor="#94DDF4", height=0.27778, label=pooled_narrowpeak_file, pos="235,45", rects="168.5,35.5,301.5,54.5", width=1.8472]; idr_narrowpeak_file [_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 305.5 35.5 305.5 54.5 418.5 54.5 418.5 35.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 362 42.5 0 97 19 -idr_narrowpeak_file ", fillcolor="#94DDF4", height=0.27778, label=idr_narrowpeak_file, pos="362,45", rects="305.5,35.5,418.5,54.5", width=1.5694]; } align_treatment [_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 113.5 260.5 113.5 279.5 208.5 279.5 208.5 260.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 161 267.5 0 79 15 -align_treatment ", fillcolor="#F3CEA1", height=0.27778, label=align_treatment, pos="161,270", rects="113.5,260.5,208.5,279.5", width=1.3194]; replicates -> align_treatment [_draw_="c 7 -#000000 B 10 156.45 313.58 150.47 309.44 144.28 303.86 141 297 139.27 293.39 139.32 291.63 141 288 141.38 287.17 141.83 286.37 \ 142.32 285.6 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 144.02 287.37 146.81 280.5 140.34 284.14 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 153 290.6 0 24 5 -reads ", label=reads, lp="153,292.5", pos="e,147.81,279.37 156.45,313.58 150.47,309.44 144.28,303.86 141,297 139.27,293.39 139.32,291.63 141,288 141.38,287.17 141.83,286.37 \ 142.32,285.6"]; align_control [_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 213 260.5 213 279.5 293 279.5 293 260.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 253 267.5 0 64 13 -align_control ", fillcolor="#F3CEA1", height=0.27778, label=align_control, pos="253,270", rects="213,260.5,293,279.5", width=1.1111]; replicates -> align_control [_draw_="c 7 -#000000 B 7 182.49 313.65 191.79 306.43 205.91 295.94 219 288 221.64 286.4 224.45 284.82 227.28 283.3 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 228.27 285.55 233.36 280.16 226.02 281.19 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 231 290.6 0 24 5 -reads ", label=reads, lp="231,292.5", pos="e,234.71,279.47 182.49,313.65 191.79,306.43 205.91,295.94 219,288 221.64,286.4 224.45,284.82 227.28,283.3"]; idxbase -> align_treatment [_draw_="c 7 -#000000 B 10 222.47 313.62 217.16 310.6 210.94 307.35 205 305 191.77 299.76 185.07 305.95 174 297 170.82 294.43 168.36 290.89 \ 166.47 287.24 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 168.75 286.35 163.79 280.84 164.23 288.24 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 190.5 290.6 0 33 7 -idxbase ", label=idxbase, lp="190.5,292.5", pos="e,163.2,279.44 222.47,313.62 217.16,310.6 210.94,307.35 205,305 191.77,299.76 185.07,305.95 174,297 170.82,294.43 168.36,290.89 \ 166.47,287.24"]; idxbase -> align_control [_draw_="c 7 -#000000 B 4 238.81 313.58 241.18 306.45 244.66 296.02 247.58 287.27 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 249.88 288.12 249.77 280.7 245.23 286.57 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 263.5 290.6 0 33 7 -idxbase ", label=idxbase, lp="263.5,292.5", pos="e,250.25,279.26 238.81,313.58 241.18,306.45 244.66,296.02 247.58,287.27"]; blacklist -> align_treatment [_draw_="c 7 -#000000 B 7 293.58 313.51 289.78 304.5 283.57 291.14 279 288 268.39 280.71 237.28 281.68 216.67 280.16 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 217.03 277.74 209.82 279.45 216.53 282.61 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 302 290.6 0 34 9 -blacklist ", label=blacklist, lp="302,292.5", pos="e,208.31,279.29 293.58,313.51 289.78,304.5 283.57,291.14 279,288 268.39,280.71 237.28,281.68 216.67,280.16"]; blacklist -> align_control [_draw_="c 7 -#000000 B 7 310.17 313.51 319.29 306.57 328.69 296.54 322 288 318.88 284.02 310.67 280.84 300.95 278.36 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 301.75 276.03 294.38 276.86 300.66 280.81 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 341 290.6 0 34 9 -blacklist ", label=blacklist, lp="341,292.5", pos="e,292.9,276.52 310.17,313.51 319.29,306.57 328.69,296.54 322,288 318.88,284.02 310.67,280.84 300.95,278.36"]; pooled_replicates_treatment [_draw_="c 7 -#000000 C 7 -#fafad2 P 4 3.5 215.5 3.5 234.5 160.5 234.5 160.5 215.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 82 222.5 0 141 27 -pooled_replicates_treatment ", height=0.27778, label=pooled_replicates_treatment, pos="82,225", rects="3.5,215.5,160.5,234.5", width=2.1806]; pooled_call_peaks [_draw_="c 7 -#000000 C 7 -#fafad2 P 4 185.5 170.5 185.5 189.5 292.5 189.5 292.5 170.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 239 177.5 0 91 17 -pooled_call_peaks ", height=0.27778, label=pooled_call_peaks, pos="239,180", rects="185.5,170.5,292.5,189.5", width=1.4861]; pooled_replicates_treatment -> pooled_call_peaks [_draw_="c 7 -#000000 B 4 113.02 215.5 137.96 208.67 173.15 199.03 200 191.68 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 200.48 194.09 206.59 189.88 199.19 189.36 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 194.5 200.6 0 41 9 -treatment ", label=treatment, lp="194.5,202.5", pos="e,208.05,189.48 113.02,215.5 137.96,208.67 173.15,199.03 200,191.68"]; idr [_draw_="c 7 -#000000 C 7 -#fafad2 P 4 132.5 125.5 132.5 144.5 161.5 144.5 161.5 125.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 147 132.5 0 13 3 -idr ", height=0.27778, label=idr, pos="147,135", rects="132.5,125.5,161.5,144.5", width=0.40278]; name_outputs [_draw_="c 7 -#000000 C 7 -#fafad2 P 4 192 80.5 192 99.5 278 99.5 278 80.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 235 87.5 0 70 12 -name_outputs ", height=0.27778, label=name_outputs, pos="235,90", rects="192,80.5,278,99.5", width=1.1944]; idr -> name_outputs [_draw_="c 7 -#000000 B 7 146 125.67 145.8 119.97 146.59 112.63 151 108 156.03 102.73 169.49 99.01 184.2 96.42 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 184.44 98.86 190.96 95.33 183.66 94.02 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 191 110.6 0 80 19 -idr_narrowpeak_file ", label=idr_narrowpeak_file, lp="191,112.5", pos="e,192.46,95.09 146,125.67 145.8,119.97 146.59,112.63 151,108 156.03,102.73 169.49,99.007 184.2,96.415"]; pooled_call_peaks -> idr [_draw_="c 7 -#000000 B 7 215.48 170.55 208.79 167.97 201.54 165.02 195 162 186.17 157.92 176.71 152.94 168.54 148.43 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 170.08 146.48 162.78 145.2 167.69 150.76 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 213 155.6 0 36 9 -peak-list ", label="peak-list", lp="213,157.5", pos="e,161.46,144.46 215.48,170.55 208.79,167.97 201.54,165.02 195,162 186.17,157.92 176.71,152.94 168.54,148.43"]; pooled_call_peaks -> name_outputs [_draw_="c 7 -#000000 B 4 238.62 170.56 237.96 156.14 236.61 126.48 235.76 107.73 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 238.21 107.68 235.45 100.8 233.32 107.9 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 286 133.1 0 98 22 -pooled_narrowpeak_file ", label=pooled_narrowpeak_file, lp="286,135", pos="e,235.38,99.284 238.62,170.56 237.96,156.14 236.61,126.48 235.76,107.73"]; align_treatment -> pooled_replicates_treatment [_draw_="c 7 -#000000 B 4 145.39 260.5 133.81 254.2 117.85 245.51 104.84 238.43 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 106.22 236.4 98.9 235.2 103.88 240.7 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 139 245.6 0 22 5 -input ", label=input, lp="139,247.5", pos="e,97.575,234.48 145.39,260.5 133.81,254.2 117.85,245.51 104.84,238.43"]; replicate_call_peaks [_draw_="c 7 -#000000 C 7 -#fafad2 P 4 165 215.5 165 234.5 281 234.5 281 215.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 223 222.5 0 100 20 -replicate_call_peaks ", height=0.27778, label=replicate_call_peaks, pos="223,225", rects="165,215.5,281,234.5", width=1.6111]; align_treatment -> replicate_call_peaks [_draw_="c 7 -#000000 B 7 170.48 260.6 176.68 255.28 185.08 248.41 193 243 195.22 241.48 197.59 239.97 199.99 238.51 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 201.01 240.75 205.82 235.11 198.54 236.52 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 213.5 245.6 0 41 9 -treatment ", label=treatment, lp="213.5,247.5", pos="e,207.13,234.34 170.48,260.6 176.68,255.28 185.08,248.41 193,243 195.22,241.48 197.59,239.97 199.99,238.51"]; replicate_call_peaks -> idr [_draw_="c 7 -#000000 B 7 185.51 215.64 171.7 210.59 157.4 202.58 149 190 141.68 179.04 141.79 163.85 143.38 152.37 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 145.77 152.93 144.6 145.61 140.95 152.06 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 166.5 178.1 0 35 7 -samples ", label=samples, lp="166.5,180", pos="e,144.86,144.12 185.51,215.64 171.7,210.59 157.4,202.58 149,190 141.68,179.04 141.79,163.85 143.38,152.37"]; replicate_call_peaks -> name_outputs [_draw_="c 7 -#000000 B 10 248.25 215.56 276.3 204.53 319.43 182.1 333 145 336.05 136.65 338.15 132.24 333 125 322.14 109.73 303.91 101.26 \ 286.1 96.58 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 286.83 94.23 279.45 95.03 285.71 99 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 384 155.6 0 110 26 -replicate_narrowpeak_files ", label=replicate_narrowpeak_files, lp="384,157.5", pos="e,277.98,94.683 248.25,215.56 276.3,204.53 319.43,182.1 333,145 336.05,136.65 338.15,132.24 333,125 322.14,109.73 303.91,101.26 \ 286.1,96.577"]; pooled_replicates_control [_draw_="c 7 -#000000 C 7 -#fafad2 P 4 285 215.5 285 234.5 427 234.5 427 215.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 356 222.5 0 126 25 -pooled_replicates_control ", height=0.27778, label=pooled_replicates_control, pos="356,225", rects="285,215.5,427,234.5", width=1.9722]; pooled_replicates_control -> pooled_call_peaks [_draw_="c 7 -#000000 B 4 332.88 215.5 314.86 208.88 289.65 199.61 269.89 192.35 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 270.9 190.12 263.49 190 269.21 194.71 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 321.5 200.6 0 29 7 -control ", label=control, lp="321.5,202.5", pos="e,262.07,189.48 332.88,215.5 314.86,208.88 289.65,199.61 269.89,192.35"]; align_control -> replicate_call_peaks [_draw_="c 7 -#000000 B 4 247.22 260.71 243.31 255.12 238.06 247.58 233.43 240.96 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 235.65 239.85 229.63 235.51 231.63 242.65 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 254.5 245.6 0 29 7 -control ", label=control, lp="254.5,247.5", pos="e,228.77,234.27 247.22,260.71 243.31,255.12 238.06,247.58 233.43,240.96"]; align_control -> pooled_replicates_control [_draw_="c 7 -#000000 B 4 273.35 260.5 289.01 253.97 310.82 244.86 328.11 237.64 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 328.78 240.02 334.3 235.06 326.89 235.5 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 324 245.6 0 22 5 -input ", label=input, lp="324,247.5", pos="e,335.69,234.48 273.35,260.5 289.01,253.97 310.82,244.86 328.11,237.64"]; name_outputs -> replicate_narrowpeak_files [_draw_="c 7 -#000000 B 4 206.35 80.5 183.51 73.73 151.38 64.2 126.66 56.87 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 127.45 54.55 120.04 54.91 126.05 59.25 ", pos="e,118.59,54.478 206.35,80.505 183.51,73.732 151.38,64.201 126.66,56.872"]; name_outputs -> pooled_narrowpeak_file [_draw_="c 7 -#000000 B 4 235 80.71 235 75.59 235 68.85 235 62.67 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 237.45 62.78 235 55.78 232.55 62.78 ", pos="e,235,54.265 235,80.709 235,75.593 235,68.848 235,62.666"]; name_outputs -> idr_narrowpeak_file [_draw_="c 7 -#000000 B 4 260.09 80.5 279.83 73.82 307.51 64.45 329.04 57.16 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 329.68 59.53 335.53 54.96 328.11 54.89 ", pos="e,336.96,54.478 260.09,80.505 279.83,73.82 307.51,64.449 329.04,57.16"]; }