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MI-R1.3-88b52fa7b8-EXPERIMENT_MEDIUM_TYPE.md

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TITLE: FAIR Maturity Indicator MI-R1.3-88b52fa7b8-EXPERIMENT_MEDIUM_TYPE

Authors:

Ammar Ammar, ORCID:0000-0002-8399-8990

Publication Date: 2021-03-18

Last Edit: 2024-04-13

Accepted: pending

Maturity Indicator Identifier: MI-R1.3-88b52fa7b8-EXPERIMENT_MEDIUM_TYPE

This maturity indicator falls under the FAIR principle R1.3: (meta)data meet domain-relevant community standards

The ID of this MI is composed of the following segments (separated by hyphen):

  1. Acronym for "Maturity Indicator"
  2. The FAIR principle this maturity indicator belongs to
  3. The first 10 characters truncated from the SHA-256 hash of the primary reference DOI of this maturity indicator.
  4. A short name to distinguish the maturity indicator definition file

This MI is to indicate if the experiment "medium type" is reported by the nano toxicity study data or not.

Maturity Indicator Name: The experiment medium type is reported by the nano toxicity study

This maturity indicator is extracted from the following paper Title: Metadata Stewardship in Nanosafety Research: Community-Driven Organization of Metadata Schemas to Support FAIR NanoScience Data REF: https://doi.org/10.3390/nano10102033

To which principle does it apply?

R1.3

What is being measured?

If the experiment medium type is reported by the nano toxicity study data or not.

Why should we measure it?

This is one of the nano particle's (NP) agglomeration-related metadata relevant for delivered dose (DD) assessment as a means to facilitate correct interpretation of in vitro bioassays and support data reuse (NOTE: not relevant for in-silico methods. Case study value: dH2O).

What must be provided for the measurement?

If the value is measured and reported in the data, the following field(s) should appear in JSON-LD metadata:

Field Name Alternative terms
experiment medium type experiment-medium-type,
experiment_medium_type

How is the measurement executed?

The "experiment medium type" should be provided in a machine-readable format (JSON-LD) which can be queried using open universal protocol like HTTP.

What is/are considered valid result(s)?

The presence of the field "experiment medium type" in the JSON-LD metadata means the measurement is reported which is the valid result.

For which digital resource(s) is this relevant? (or 'all')

For nano toxicity related datasets.

Examples of good practices (that would score well on this assessment)

{
 	"@context": {
 		"bs": "https://bioschemas.org/",
 		"schema": "https://schema.org/",
 		"citation": "schema:citation",
 		"name": "schema:name",
 		"url": "schema:url",
 		"variableMeasured": "schema:variableMeasured",
 		"unitText": "schema:unitText"
 	},
 	"@type": "schema:Dataset",
 	"name": "Dataset title",
 	"@id": "Dataset DOI",
 	"url": "Dataset URL",
 	"citation": "Dataset Citation/Publication",
 	"variableMeasured": [
 		{
 			"@type": "schema:PropertyValue",
 			"name": "experiment medium type"
 		}
 	]
 }

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