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Class: Evidence

URI: reaction:Evidence

erDiagram Evidence { string id string label }

Inheritance

Slots

Name Cardinality and Range Description Inheritance
id 1
String
A unique identifier for the named entity NamedEntity
label 0..1
String
The label (name) of the named thing NamedEntity

Usages

used by used in type used
ReactionDocument has_evidence range Evidence

Identifier and Mapping Information

Valid ID Prefixes

Instances of this class should have identifiers with one of the following prefixes:

  • OBI

  • ECO

  • MS

Annotations

property value
annotators sqlite:obo:obi, sqlite:obo:eco, sqlite:obo:ms

Schema Source

  • from schema: https://w3id.org/ontogpt/reaction

Mappings

Mapping Type Mapped Value
self reaction:Evidence
native reaction:Evidence

LinkML Source

Direct

name: Evidence
id_prefixes:
- OBI
- ECO
- MS
annotations:
  annotators:
    tag: annotators
    value: sqlite:obo:obi, sqlite:obo:eco, sqlite:obo:ms
from_schema: https://w3id.org/ontogpt/reaction
is_a: NamedEntity

Induced

name: Evidence
id_prefixes:
- OBI
- ECO
- MS
annotations:
  annotators:
    tag: annotators
    value: sqlite:obo:obi, sqlite:obo:eco, sqlite:obo:ms
from_schema: https://w3id.org/ontogpt/reaction
is_a: NamedEntity
attributes:
  id:
    name: id
    annotations:
      prompt.skip:
        tag: prompt.skip
        value: 'true'
    description: A unique identifier for the named entity
    comments:
    - this is populated during the grounding and normalization step
    from_schema: https://w3id.org/ontogpt/reaction
    rank: 1000
    identifier: true
    alias: id
    owner: Evidence
    domain_of:
    - NamedEntity
    - Publication
    range: string
    required: true
  label:
    name: label
    annotations:
      owl:
        tag: owl
        value: AnnotationProperty, AnnotationAssertion
    description: The label (name) of the named thing
    from_schema: https://w3id.org/ontogpt/reaction
    aliases:
    - name
    slot_uri: rdfs:label
    alias: label
    owner: Evidence
    domain_of:
    - Reaction
    - NamedEntity
    range: string