Workflow: Search All HMMs I
Fetched 2023-01-04 23:51:05 GMT
Verified with cwltool version 3.1.20221201130942
- Selected
- |
- Default Values
- Nested Workflows
- Tools
- Inputs/Outputs
Unknown workflow license, check
source repository.
Inputs
| ID | Type | Title | Doc |
|---|---|---|---|
| lds2 | File | ||
| seqids | File | ||
| hmm_path | Directory | ||
| hmms_tab | File | ||
| proteins | File | ||
| asn_cache | Directory |
Steps
| ID | Runs | Label | Doc |
|---|---|---|---|
| gpx_qdump |
gpx_qdump.cwl
(CommandLineTool)
|
Search All HMMs I, gather | |
| hmmsearch_wnode |
hmmsearch_wnode.cwl
(CommandLineTool)
|
HMM Searchers | |
| hmmsearch_create_jobs |
hmmsearch_create_jobs.cwl
(CommandLineTool)
|
Search All HMMs I, scatter |
Outputs
| ID | Type | Label | Doc |
|---|---|---|---|
| hmm_hits | File |
Permalink:
https://w3id.org/cwl/view/git/21baa197e2c87a71e48794cef96d24c52518a99c/bacterial_annot/wf_hmmsearch.cwl
