Workflow: fastqc-0-11-4-1.cwl
Fetched 2023-01-12 11:54:41 GMT
Verified with cwltool version 3.1.20221201130942
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This workflow is Open Source and may be reused according to the terms of:
MIT License
Note that the tools invoked by the workflow may have separate licenses.
Inputs
| ID | Type | Title | Doc |
|---|---|---|---|
| threads | Integer (Optional) |
Specifies the number of files which can be processed simultaneously. Each thread will be allocated 250MB of memory so you shouldn't run more threads than your available memory will cope with, and not more than 6 threads on a 32 bit machine. |
|
| input_fastq | File |
Steps
| ID | Runs | Label | Doc |
|---|---|---|---|
| FastQC |
fastqc-0-11-4.cwl
(CommandLineTool)
|
Outputs
| ID | Type | Label | Doc |
|---|---|---|---|
| report_zip | File (Optional) |
Permalink:
https://w3id.org/cwl/view/git/46dbd4c38119ef8a2d00b44678e45dafd430f5fa/cwl_awsem_v1/fastqc-0-11-4-1.cwl
