Workflow: Seed Search Compartments

Fetched 2023-01-05 07:23:25 GMT
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workflow cluster_inputs Workflow Inputs cluster_outputs Workflow Outputs asn_cache asn_cache tblastn_wnode Seed Search Compartments, execute" asn_cache->tblastn_wnode asn_cache gpx_qsubmit Seed Search Compartments, scatter asn_cache->gpx_qsubmit asn_cache compartments compartments compartments->tblastn_wnode asn compartments->gpx_qsubmit asn db_gencode db_gencode db_gencode->tblastn_wnode db_gencode uniColl_asn_cache uniColl_asn_cache uniColl_asn_cache->tblastn_wnode uniColl_asn_cache uniColl_asn_cache->gpx_qsubmit uniColl_asn_cache blast_align blast_align gpx_dump Seed Search Compartments, gather tblastn_wnode->gpx_dump input_path gpx_dump->blast_align gpx_qsubmit->tblastn_wnode input_jobs
Workflow as SVG
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Inputs

ID Type Title Doc
asn_cache Directory
db_gencode Integer
compartments File
uniColl_asn_cache Directory

Steps

ID Runs Label Doc
gpx_dump
gpx_qdump.cwl (CommandLineTool)
Seed Search Compartments, gather
gpx_qsubmit
gpx_qsubmit.cwl (CommandLineTool)
Seed Search Compartments, scatter
tblastn_wnode
tblastn_wnode.cwl (CommandLineTool)
Seed Search Compartments, execute\"

Outputs

ID Type Label Doc
blast_align File
Permalink: https://w3id.org/cwl/view/git/5ec226c941562124032ca6861bc8d1aeabf9d91a/protein_alignment/wf_seed.cwl