Workflow: spurious_annot

Fetched 2023-01-14 20:13:05 GMT
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workflow cluster_inputs Workflow Inputs cluster_outputs Workflow Outputs AntiFamLib AntiFamLib Search_AntiFam_I Search_AntiFam_I AntiFamLib->Search_AntiFam_I hmm_path Extract_ORF_Proteins_seqids Extract_ORF_Proteins_seqids Extract_ORF_Proteins_seqids->Search_AntiFam_I seqids sequence_cache sequence_cache sequence_cache->Search_AntiFam_I asn_cache Extract_ORF_Proteins_lds2 Extract_ORF_Proteins_lds2 Extract_ORF_Proteins_lds2->Search_AntiFam_I lds2 scatter_gather_nchunks scatter_gather_nchunks scatter_gather_nchunks->Search_AntiFam_I scatter_gather_nchunks Extract_ORF_Proteins_proteins Extract_ORF_Proteins_proteins Extract_ORF_Proteins_proteins->Search_AntiFam_I proteins AntiFam_tainted_proteins_I___oseqids AntiFam_tainted_proteins_I___oseqids AntiFam_tainted_proteins_I reduce Search_AntiFam_I->AntiFam_tainted_proteins_I aligns AntiFam_tainted_proteins_I->AntiFam_tainted_proteins_I___oseqids
Workflow as SVG
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Inputs

ID Type Title Doc
AntiFamLib Directory
sequence_cache Directory
scatter_gather_nchunks String
Extract_ORF_Proteins_lds2 File
Extract_ORF_Proteins_seqids File
Extract_ORF_Proteins_proteins File

Steps

ID Runs Label Doc
Search_AntiFam_I
AntiFam_tainted_proteins_I
../progs/reduce.cwl (CommandLineTool)
reduce

Outputs

ID Type Label Doc
AntiFam_tainted_proteins_I___oseqids File
Permalink: https://w3id.org/cwl/view/git/5ec226c941562124032ca6861bc8d1aeabf9d91a/spurious_annot/wf_spurious_annot_pass1.cwl