- Selected
- |
- Default Values
- Nested Workflows
- Tools
- Inputs/Outputs
Unknown workflow license, check
source repository.
Inputs
ID | Type | Title | Doc |
---|---|---|---|
script | File | ||
ROH_chr | File[] | ||
vcf_file | File | ||
sample_mapping | File |
Steps
ID | Runs | Label | Doc |
---|---|---|---|
ROH_calc |
../../tools/roh_comparison/ROH_comparison.cwl
(CommandLineTool)
|
Run script to calculate het calls in known region of homozygosity (ROH) |
|
ROH_combine |
../../tools/roh_comparison/ROH_combine.cwl
(CommandLineTool)
|
Concatenate vcfs |
Outputs
ID | Type | Label | Doc |
---|---|---|---|
stats | File |
Permalink:
https://w3id.org/cwl/view/git/8d0588a3fc25c9b91369f3cbbe9066d0cd4b9418/cwl/workflows/analysis-workflows/ROH_workflow.cwl