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Slot: qc_comment

Slot to store additional comments about laboratory or workflow output. For workflow output it may describe the particular workflow stage that failed. (ie Failed at call-stage due to a malformed fastq file).

URI: nmdc:qc_comment

Applicable Classes

Name Description Modifies Slot
NomAnalysisActivity no
PlannedProcess no
MetatranscriptomeActivity A metatranscriptome activity that e no
ReadQcAnalysisActivity A workflow execution activity that performs quality control on raw Illumina r... no
FiltrationProcess The process of segregation of phases; e no
Extraction A material separation in which a desired component of an input material is se... no
LibraryPreparation no
MetagenomeAssembly A workflow execution activity that converts sequencing reads into an assemble... no
MetabolomicsAnalysisActivity no
OmicsProcessing The methods and processes used to generate omics data from a biosample or org... no
MetagenomeSequencingActivity Initial sequencing activity that precedes any analysis no
SubSamplingProcess Separating a sample aliquot from the starting material for downstream activit... no
ChromatographicSeparationProcess The process of using a selective partitioning of the analyte or interferent b... no
WorkflowExecutionActivity Represents an instance of an execution of a particular workflow no
MetagenomeAnnotationActivity A workflow execution activity that provides functional and structural annotat... no
MetaproteomicsAnalysisActivity no
Pooling physical combination of several instances of like material no
MetatranscriptomeAssembly no
ReadBasedTaxonomyAnalysisActivity A workflow execution activity that performs taxonomy classification using seq... no
BiosampleProcessing A process that takes one or more biosamples as inputs and generates one or mo... no
CollectingBiosamplesFromSite no
MetatranscriptomeAnnotationActivity no
MixingProcess The combining of components, particles or layers into a more homogeneous stat... no
MagsAnalysisActivity A workflow execution activity that uses computational binning tools to group ... no

Properties

Identifier and Mapping Information

Schema Source

LinkML Source

name: qc_comment
description: Slot to store additional comments about laboratory or workflow output.
  For workflow output it may describe the particular workflow stage that failed. (ie
  Failed at call-stage due to a malformed fastq file).
from_schema: https://w3id.org/nmdc/nmdc
rank: 1000
alias: qc_comment
domain_of:
- PlannedProcess
- WorkflowExecutionActivity
range: string