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Slot: started_at_time

URI: nmdc:started_at_time

Applicable Classes

Name Description Modifies Slot
MetatranscriptomeExpressionAnalysis A workflow process that provides expression values and read counts for gene f... no
MetatranscriptomeAssembly no
MetagenomeAnnotation A workflow execution activity that provides functional and structural annotat... no
NomAnalysis no
ReadQcAnalysis A workflow execution activity that performs quality control on raw Illumina r... no
MetabolomicsAnalysis no
MetagenomeSequencing Initial sequencing activity that precedes any analysis no
WorkflowExecution Represents an instance of an execution of a particular workflow yes
MetagenomeAssembly A workflow execution activity that converts sequencing reads into an assemble... no
MetaproteomicsAnalysis no
MetatranscriptomeAnnotation no
ReadBasedTaxonomyAnalysis A workflow execution activity that performs taxonomy classification using seq... no
AnnotatingWorkflow A WorkflowExecution whose output indicates the potential functions of genes o... no
MagsAnalysis A workflow execution activity that uses computational binning tools to group ... no

Properties

  • Range: String

  • Regex pattern: ^([\+-]?\d{4}(?!\d{2}\b))((-?)((0[1-9]|1[0-2])(\3([12]\d|0[1-9]|3[01]))?|W([0-4]\d|5[0-2])(-?[1-7])?|(00[1-9]|0[1-9]\d|[12]\d{2}|3([0-5]\d|6[1-6])))([T\s]((([01]\d|2[0-3])((:?)[0-5]\d)?|24\:?00)([\.,]\d+(?!:))?)?(\17[0-5]\d([\.,]\d+)?)?([zZ]|([\+-])([01]\d|2[0-3]):?([0-5]\d)?)?)?)?$

Identifier and Mapping Information

Schema Source

Mappings

Mapping Type Mapped Value
mappings prov:startedAtTime

LinkML Source

name: started_at_time
notes:
- 'The regex for ISO-8601 format was taken from here: https://www.myintervals.com/blog/2009/05/20/iso-8601-date-validation-that-doesnt-suck/
  It may not be complete, but it is good enough for now.'
from_schema: https://w3id.org/nmdc/nmdc
mappings:
- prov:startedAtTime
rank: 1000
alias: started_at_time
domain_of:
- WorkflowExecution
range: string
pattern: ^([\+-]?\d{4}(?!\d{2}\b))((-?)((0[1-9]|1[0-2])(\3([12]\d|0[1-9]|3[01]))?|W([0-4]\d|5[0-2])(-?[1-7])?|(00[1-9]|0[1-9]\d|[12]\d{2}|3([0-5]\d|6[1-6])))([T\s]((([01]\d|2[0-3])((:?)[0-5]\d)?|24\:?00)([\.,]\d+(?!:))?)?(\17[0-5]\d([\.,]\d+)?)?([zZ]|([\+-])([01]\d|2[0-3]):?([0-5]\d)?)?)?)?$